DNA replication control: Liquid-liquid phase separation comes into play

Patroula Nathanailidou, Stavros Taraviras, Zoi Lygerou

Abstract


Liquid-liquid phase separation (LLPS) has been recently suggested as a new potential mechanism underpinning various organizational aspects of the cell, from the formation of sub-cellular, biomolecule enrichments to the assembly of organelles. In eukaryotes, DNA replication follows a strict temporal and spatial program that is majorly affected by the chromatin structure, the nuclear organization and the availability of limiting initiation factors, however the regulatory mechanisms driving the process have not been fully elucidated. Original data published lately revealed for the first time that the components of the pre-replicative complex, ORC, Cdc6 and Cdt1, are able to phase separate indicating a possible connection between LLPS and DNA replication. Here, we critically present these preliminary data and propose mechanistic models that could support this regulatory link and lead to new future research directions.


Keywords


DNA replication; phase separation; replication program; DNA replication licensing

References


Bell SP 2017 Rethinking origin licensing. eLife 6 e24052

Boeynaems S, Alberti S, Fawzi NL, Mittag T, Polymenidou M, Rousseau F, Schymkowitz J, Shorter J, Wolozin B, Van Den Bosch L, Tompa P & Fuxreiter M 2018 Protein Phase Separation: A New Phase in Cell Biology. Trends Cell Biol 28 420-435

Champeris Tsaniras S, Villiou M, Giannou AD, Nikou S, Petropoulos M, Pateras IS, Tserou P, Karousi F, Lalioti ME, Gorgoulis VG, Patmanidi AL, Stathopoulos GT, Bravou V, Lygerou Z & Taraviras S 2018 Geminin ablation in vivo enhances tumorigenesis through increased genomic instability. J Pathol 246 134-140

Das SP, Borrman T, Liu VWT, Yang SCH, Bechhoefer J & Rhind N 2015 Replication timing is regulated by the number of MCMs loaded at origins. Genome Research 25 1886-1892

Das SP & Rhind N 2016 How and why multiple MCMs are loaded at origins of DNA replication. BioEssays 38 613-617

Dimitrova DS & Gilbert DM 1999 The spatial position and replication timing of chromosomal domains are both established in early G1 phase. Mol Cell 4 983-993

Fragkos M, Ganier O, Coulombe P & Méchali M 2015 DNA replication origin activation in space and time. Nat Rev Mol Cell Biol 16 360-374

Leonhardt H, Rahn HP, Weinzierl P, Sporbert A, Cremer T, Zink D & Cardoso MC 2000 Dynamics of DNA Replication Factories in Living Cells. J Cell Biol 149 271-280

McSwiggen DT, Mir M, Darzacq X & Tjian R 2019 Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences. Genes & Development 33 1619-1634

Parker MW, Bell M, Mir M, Kao JA, Darzacq X, Botchan MR & Berger JM 2019 A new class of disordered elements controls DNA replication through initiator self-assembly. eLife 8 e48562

Rhind N & Gilbert DM 2013 DNA replication timing. Cold Spring Harb Perspect Biol 5 a010132


Full Text: PDF

Refbacks

  • There are currently no refbacks.


Copyright © 2021 Journal of Molecular Biochemistry